NUNES Jean-Claude
(LTSI INSERM UMR 1099, Université de Rennes 1)

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 Contributions   des ouvrages collectifs

 J. Dro, J.C. Nunes, P. Siarry, chapter 11 "Metaheuristics and registration of angiographies", of book: Optimization in imaging and signal processing, Hermes-Lavoisier, ISTE, WILEY, June 2009.

 J. Dro, J.C. Nunes, and P. Siarry, chapitre 11 "Mtaheuristiques en variables continues. Exemple du recalage des images dangiographie rtinienne" du livre "Optimisation en traitement du signal et de limage", Trait IC2 de Herms-Lavoisier, Coordinateur : Patrick SIARRY, ISBN: 2746214636, 2006,  Rsum.

 

 Articles de Revue internationale

 A. Largent, A. Barateau, J.C. Nunes, C. Lafond, P.B. Greer, J.A. Dowling, H. Saint-Jalmes, O. Acosta, R. Crevoisier, "29 Pseudo-CT generation for MRI-only radiotherapy treatment planning: comparison between patch-based, atlas-based and bulk density methods", Physica Medica, vol. 56, Supp. 1, December 2018.

 A. Largent, A. Barateau, J.C. Nunes, C. Lafond, P.B. Greer, J.A. Dowling, H. Saint-Jalmes, O. Acosta, R. Crevoisier, "Pseudo-CT generation for MRI-only radiotherapy treatment planning: comparison between patch-based, atlas-based, and bulk density methods", International journal of radiation oncology, October 2018.

 A. Largent, A. Barateau, J.C. Nunes, C. Lafond, P.B. Greer, J.A. Dowling, H. Saint-Jalmes, O. Acosta, R. Crevoisier, "Calcul de dose partir dIRM en radiothrapie de la prostate : comparaison de trois mthodes de gnration de pseudo-scanographie", Cancer/Radiothrapie, vol. 22, n6-7, October 2018.

 S. Li, J.C. Nunes, C. Toumoulin, L. Luo, "3D Coronary Artery Reconstruction by 2D Motion Compensation Based on Mutual Information", IRBM Elsevier, vol. 39, Issue 1, June 2018.

 S. Li, J.C. Nunes, M. Castro, C. Toumoulin, L. Luo, "Calibration of Artis-Zeego C-arm cone beam computerized tomography angiography imaging system", Optical Engineering, vol. 57, Issue 6, June 2018.

 A. Largent, L. Marage, I. Gicquiau, G. Gambarota, H. Chajon, O. Acosta, J.C. Nunes, R. De Crevoisier, H. Saint-Jalmes, "MRI acquisition in radiotherapy treatment position: sequence optimization for head and neck cancer", Radiotherapy and Oncology, vol. 127, suppl. 1, April 2018.

 C. Simoncini, K. Jurczuk, D. Reska, S. Esneault, J.C. Nunes, J.-J. Bellanger, H. Saint-Jalmes, Y. Rolland, P.-A. Eliat, J. Bzy-Wendling, M. Kretowski, "Towards a patient-specific hepatic arterial modeling for microspheres distribution optimization in SIRT protocol", NeuroImage, vol. 56, Issue 15, March 2018.

 A. Largent, J.C. Nunes, C. Lafond, N. Prichon, J. Castelli, Y. Rolland, O. Acosta, R. de Crevoisier, "MRI acquisition in radiotherapy treatment position: sequence optimization for head and neck cancer", Cancer/Radiothrapie, vol. 21, Issue. 8, April 2018.

 H. Becker, L. Albera, P. Comon, J.C. Nunes, R. Gribonval, J.Fleureau, P. Guillotel, I. Merlet, "SISSY: An efficient and automatic algorithm for the analysis of EEG sources based on structured sparsity", NeuroImage, vol. 57, Issue 15, August 2017.

 H. Feuilltre, J.C. Nunes, C. Toumoulin, "An improved graph matching algorithm for the spatio-temporal matching of a coronary artery 3D tree sequence". IRBM Elseviervol. 36, Issue 6, August 2015.

 M. Rubeaux, J.C. Nunes,  L. Albera, M. Garreau, "Medical image registration using Edgeworth-based approximation of Mutual Information", IRBM Elsevier, vol. 35, Issue 3, February 2014.

 H. Feuilltre, B. Sanokho, J.C. Nunes,  M. Bedossa, C. Toumoulin , " Automatic determination of optimal view for the visualization of coronary lesions by rotational X-ray angiography", IRBM Elsevier, vol. 34, Issues 4-5, november 2013.

 J. Fleureau, J.C. Nunes, A. Kachenoura, L. Albera and L. Senhadji , "Turning Tangent Empirical Mode Decomposition: A framework for mono- and Multivariate Signals", IEEE Transactions on signal Processing, vol. 59, n3, march 2011.

 Y. Hu, L. Xie, L. Luo, J.C. Nunes and C. Toumoulin, "L0 constrained sparse reconstruction for multi-slice helical CT reconstruction", Physics in Medicine and Biology (PMB), vol. 56, n1173, 2011.

 J. Fleureau, A. Kachenoura, L. Albera, J.C. Nunes, and L. Senhadji , "Multivariate empirical mode decomposition and application to multichannel filtering", Signal Processing, Elsevier, vol. 91, n 12,  pp. 2783279, December, 2011.

 J.C. Nunes, and E. Delchelle, "Image analysis and empirical mode decomposition", Advances in Adaptive Data Analysis (AADA), vol. 1, n°1, 2009.

 J. Dro,  J.C. Nunes, and P. Siarry, "Robust rigid registration of retinal angiograms through optimization", Computerized Medical Imaging and Graphics (CMIG), Volume 30, Issue 8, Pages 453-463, 2006,  Rsum, Citations.

 J.C. Nunes, and A. Nait-Ali, "Hilbert Transform-Based ECG modeling", Biomedical Engineering (BME), Springer, vol. 39, No. 3, 2005, 133-137, Rsum.

 E. Delchelle, J.C. Nunes, J. Lemoine, "Empirical mode decomposition synthesis of fractional processes in 1D- and 2D-space", Image and Vision Computing Journal (IVC), vol. 23, Issue 9, September 2005, pp. 799-806, Rsum, Citations.

 J.C. Nunes, and A. Nait-Ali, "ECG compression by modelling the instantaneous module/phase of its DCT", Journal of Clinical Monitoring and Computing (JCMC), Springer, vol.19, issue 3, pp. 207-214, June 2005, Rsum.

 J.C. Nunes, S. Guyot, and E. Delchelle, "Texture analysis based on local analysis of the bidimensional empirical mode decomposition", Journal of Machine Vision and Applications (MVA), 2005, vol. 16, Issue 3, May 2005, pp. 177-188, Rsum, Citations.

 J.C. Nunes, Y. Bouaoune, E. Delchelle, and P. Bunel, "A Multiscale Registration Scheme of Retinal Angiograms", Computer Vision and Image Understanding Journal (CVIU), Vol. 95 (2), 2004, pp 129-149, Rsum, Citations.

 J.C. Nunes, Y. Bouaoune, E. Delchelle, N. Oumar, and P. Bunel, "Image analysis by bidimensional empirical mode decomposition", Image and Vision Computing Journal (IVC), Vol. 21, November 2003, pp 1019-1026. Rsum, Citations.

 Y. Bouaoune, M.K. Assogba, J.C. Nunes, and P. Bunel, "Spatio-temporal characterization of vessel segments applied to retinal angiographic images", Pattern Recognition Letters (PRL), Vol. 24, 2003, pp 607-615, Rsum.

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 Communications internationales avec actes

 A. Largent, J.C. Nunes, H. Saint-Jalmes, A. Simon, N. Perichon, A. Barateau, C. Herv, C. Lafond, P.B. Greer, J.A. Dowling, R. de Crevoisier, O. Acosta, "Pseudo-CT Generation by Conditional Inference Random Forest for MRI-based Radiotherapy Treatment Planning". EUSIPCO, August 2017.

 H. Feuilltre, J.C. Nunes, C. Toumoulin, "Inexact coronary tree matching algorithm with artificial nodes". 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), August 2016.

 H. Feuilltre, J.C. Nunes, S. Li, C. Toumoulin, "Coronary Tree Matching Based on Association Graphs with Artificial Nodes".6th European Conference of the International Federation for Medical and Biological Engineering (MBEC), September 2014.

 A. Oukil, J.C. Nunes, Y. Chen, L. Luo and C. Toumoulin, "Object-based 3D binary reconstruction from sparse projections in cone beam CT: Comparison of three projection operators". ISBI 2013 IEEE 10th International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), San Francisco, CA, USA, April 7-11, 2013.

 Y. Hu, M.Y. Jung, A. Oukili, G. Yang, Nunes J.C., J. Fehrenbach, G. Peyr, M. Bedossa, L. Luo, C. Toumoulin, L.D. Cohen, "Sparse reconstruction from a limited projection number of the coronary artery tree in X-ray rotational imaging". ISBI 2012 IEEE 9th International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Barcelona, Spain, 2-5 May, 2012.

 A. Oukili., Y. Hu, J.C. Nunes, M. Bedossa, L. Luo, C. Toumoulin, "Reconstruction 3D des artres coronaires en imagerie rotationnelle RX". RITS 2011 (Colloque National Recherche en Imagerie et Technologies pour la Sant). Rennes, France.

 J. Fleureau, A. Kachenoura, J.C. Nunes, L. Albera, L. Senhadji, "3A-EMD: a  Generalized Approach  for Monovariate and Multivariate EMD", International Conference on Information Sciences, Signal Processing and Their Applications (10th ISSPA 2010), on 10-13th May 2010 in Kuala Lumpur, Malaysia, 2010.

 
M. RubeauxJ.C. Nunes, L. Albera, M. Garreau, "Edgeworth-based approximation of Mutual Information for medical image registration", International Conference on Image Processing Theory, Tools and Applications (IPTA), Evry, 2010.

 Y. Hu, L. Xie, 
J.C. Nunes, J.J. Bellanger, C. Toumoulin, "ECG Gated Reconstruction for 3-D Rotational Coronary Angiography", 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2010, on Aug. 29-Sep. 4, 2010, Buenos Aires.

 L. Xie, Y. Hu, 
J.C. Nunes, J.J. Bellanger, L. Luo, C. Toumoulin, "A model-based reconstruction method for 3-D Rotational Coronary Angiography", 32nd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), on Aug. 29-Sep. 4, 2010,  Buenos Aires.

 
M. Rubeaux, J.C. Nunes, L. Albera, M. Garreau. "Dense motion estimation of the heart using Gram-Charlier based mutual information". Proceedings of IEEE Computers in Cardiology (CinC'09); 2009 Sep 13-16; Park City, Utah, USA; 2009. p. 609-12.

 V. Burdin-Fracasso , J.L. Dillenseger, J. Montagner, J.C. Nunes, J.L. Coatrieux, C. Roux, "The futures of biomedical imaging", Biomedical Imaging VIII, 8th IEEE EMBS International Summer School on Biomedical Imaging, Berder Island, France, June 20-28, 2008.

 K. Torres, T.L. Pham, S. Esneault, J.C. Nunes, E. Delabrousse, J.L. Dillenseger, "Segmentation dimages scanner X du foie par Max-Flow/Min-Cut", GRETSI'2007 - 21me Colloque GRETSI sur le traitement du signal et des images, (Troyes, France), 11-14 septembre 2007

 M. Ndiaye, J-J. Montois, A. Kini, J.C. Nunes, Y. Jacquelet, "Contrle par systme multi-agent dans lanalyse vectorielle des signaux pileptiques", IA2006 Colloque International sur lInformatique et ses Applications, Oujda (Maroc), 31 Octobre, 1 et 2 Novembre 2006,  pp. 336-337.

 J. Dro,  J.C. Nunes, P. Truchetet, and P. Siarry, "Retinal angiogram registration by estimation of distribution algorithm", 6th IFAC Symposium on Modelling and Control in Biomedical Systems (Including Biological Systems), MCBMS'06 , 20-22 september 2006, (Reims, France).

 J.C. Nunes, and E. Delchelle, "Empirical mode decomposition: applications on signal and image", The first International Conference on the advances of Hilbert-Huang Transform and its applications , 15-17 March 2006, (Chungli, Tawan), Rsum.

 P. Truchetet, J. Dro, J.C. Nunes and P. Siarry, "Application dun algorithme estimation de distribution au recalage dimages dangiographie rtinienne", ROADEF2005, (Tours, France), 6me congrs de la Socit Franaise de Recherche Oprationnelle et d'Aide   la Dcision, 14-16 fvrier 2005.

 J.C. Nunes, J. Dro and P. Siarry, "Rigid registration of retinal angiograms through Nelder-Mead optimisation", IWESA2004, International Workshop on Electronics and System Analysis, 21-22 October 2004, (Bilbao, Spain).

 J.C. Nunes, O. Niang, Y. Bouaoune, E. Delchelle, and P. Bunel, "Texture analysis based on the Bidimensional Empirical Mode Decomposition with Gray-Level Co-occurrence models", ISSPA'2003, 7th International Symposium on Signal Processing and its Applications, (Paris, France), IEEE, EURASIP, 1-4 July 2003.

 J.C. Nunes, O. Niang, Y. Bouaoune, E. Delchelle, and P. Bunel, "Bidimensional Empirical Mode Decomposition modified for texture analysis", SCIA'2003 13th Scandinavian Conference on Image Analysis, (Gteborg, Sweden), June 29-July 2 2003, vol. 2749, 171-177.

 J.C. Nunes, O. Niang, Y. Bouaoune, E. Delchelle, and P. Bunel. "Dcomposition Empirique Multimodale Bidimensionnelle Modifie pour l'analyse d'images", GRETSI'2003 - 19me Colloque GRETSI sur le traitement du signal et des images, (Paris, France), 8-11 septembre 2003.

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 Communications nationales avec actes

 J.C. Nunes, "Mthode automatique de recalage dune squence dangiographie rtinienne", Forum des Jeunes Chercheurs en Gnie Biologique et Mdical, Journe de Recherche en Imagerie Mdicale, SFGBM 2003 (Nantes, France), 21-22 mai 2003.

 J.C. Nunes, "Recalage dimages dangiographie rtinienne   la fluorescine", Colloque National de la Recherche en IUT, CNRIUT 2003 (Tarbes, France), 15-16 mai 2003.

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 Sminaires

 J.C. Nunes, E. Delchelle, and J. Lemoine, "Dcomposition Modale Empirique Bidimensionelle (BEMD)",  Partie 1Partie 2., Journe "Dcompositions Adaptatives", Thme A (Signal et Information : Thorie et Mthodes) du GdR ISIS, avril 2004.

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 Ecole d't  (Summer School)

 8th IEEE EMBS International Summer School on Biomedical Imaging. Berder, France, 20-28 June, 2008 (organization committee).

 

 7th IEEE EMBS, International Summer School on Biomedical Imaging, Berder, France, 17-25 June, 2006.

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 Thse de doctorat

Thse de Doctorat en Sciences, spcialit: Signaux et Images en Mdecine, Analyse multichelle d'image. Application  l'angiographie rtinienne et la DMLA. Universit Paris 12, Val de Marne, soutenue le 4 dcembre 2003, sous la Direction de P. Bunel.

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